Plots epipolymorphism
gpatterns.epipoly_plot(tracks, intervals, colnames = NULL, pat_len = 5,
median_line_binsize = 6, meth_binsize = 0.01, fig_ofn = NULL,
width = NULL, height = NULL, ncolumns = 3, separate_figs = FALSE)
Arguments
- tracks
- track names
- intervals
- genomic scope for which the function is applied
- colnames
- column names for the samples (useful when track names are too long
- pat_len
- pattern length
- median_line_binsize
- number of bins to smooth in median line
- meth_binsize
- size of bin for methyltion in x axis
- fig_ofn
- figure file name. if NULL plotting would occur on the current device
- width
- figure width in inches
- height
- figure width in inches
- ncolumns
- number of columns
- separate_figs
- plot each track in a separate figure
Value
plot. If seperate.figs=TRUE list of plots
Examples