Write a McPeaks or ScPeaks object to an h5ad file

Usage

export_to_h5ad(object, out_file, ...)

object

McPeaks or ScPeaks object

out_file

name of the output file

...

Arguments passed on to anndata::write_h5ad

anndata: An AnnData() object
filename: Filename of data file. Defaults to backing file.
compression: See the h5py filter pipeline. Options are "gzip", "lzf" or NULL.
compression_opts: See the h5py filter pipeline.
as_dense: Sparse in AnnData object to write as dense. Currently only supports "X" and "raw/X".

None.

if (FALSE) {
atac_sc <- import_from_10x("pbmc_data", genome = "hg38")
export_to_h5ad(atac_sc, "pbmc_data/atac_sc.h5ad")
}