Exports results from scSet

Exports results from scSet

export(scSet, ...)

Arguments

scSet

scSet containing the results
outdir

String. Creates a new directory with timestamp prefix in outdir and exports results. If NULL and force = TRUE, the folder is created in the current working directory.
full

Logical. If TRUE, additionally exports stats for all guideRNAs and combinations (instead of only selected guides).
force

Logical. If TRUE and outdir = NULL, writes output to new folder in current working directory.
workspace

Logical. If FALSE (the default), suppresses additional export of scSet as .RData file.
dpi

Integer. Resolution of exported images.

Examples

# NOT RUN {
gs <- createscSet(Hsapiens, tes = te_annotation_df)
gs <- addTargets(gs, targets = 'LTR13')
gs <- addGuides(gs, guide_length = 16, n_mismatches = 0, gc_content = c(0.25, 0.9), n_clust = 12)
gs <- plotGuides(gs)
export(gs, outdir = NULL, force = TRUE) # Creates new folder in current working directory and exports results  
# }