Compute features for an IQFeatureGroup — iq_feature_group.compute • iceqream

This function computes all features in the group for a given set of sequences or intervals.

Usage

iq_feature_group.compute(group, sequences = NULL, intervals = NULL)

Arguments

group: An IQFeatureGroup object.
sequences: A vector of DNA sequences. Optional if intervals are provided.
intervals: A data frame of genomic intervals with columns 'chrom', 'start', and 'end'. Optional if sequences are provided.

Value

A matrix of computed and normalized feature values.