Predict method for IQmodel — predict,IQmodel-method • iceqream

This method makes predictions using an IQmodel object on new data.

Usage

# S4 method for class 'IQmodel'
predict(
  object,
  new_data = NULL,
  intervals = NULL,
  sequences = NULL,
  pbm_responses = NULL,
  iq_responses = NULL
)

Arguments

object: An IQmodel object
new_data: Optional data frame or matrix of new data for IQ features
intervals: Optional genomic intervals
sequences: Optional DNA sequences
pbm_responses: Optional pre-computed PBM responses
iq_responses: Optional pre-computed IQ responses

Value

A vector of normalized and rescaled predictions