Relearn Trajectory Model — relearn_traj

This function relearns a trajectory model using the glmnet package, without re-inferring the motif models.

Usage

relearn_traj_model(
  traj_model,
  new_energies = FALSE,
  new_logist = FALSE,
  lambda = NULL,
  use_additional_features = TRUE,
  use_motifs = TRUE,
  verbose = FALSE
)

Arguments

traj_model: The trajectory model object.
new_energies: If TRUE - recreate the energies. Default is FALSE.
new_logist: If TRUE - recreate the logistic features. Default is FALSE. If new_energies is TRUE, this is automatically set to TRUE.
lambda: The lambda value to use for relearning. If NULL, the lambda value from the trajectory model is used.
use_additional_features: A logical value indicating whether to use additional features. Default is TRUE.
use_motifs: A logical value indicating whether to use motif models. Default is TRUE.
verbose: Logical indicating whether to display additional information.

Value

The updated trajectory model object.