Calculate correlations for multiple genes individually

Calculate correlations for multiple genes individually

Usage

calc_individual_correlations(
  dataset,
  genes,
  n_top = 30,
  cell_type_filter = NULL,
  threshold = 0,
  atlas = FALSE
)

Arguments

dataset

Dataset name

genes

Vector of gene names

n_top

Number of top correlations to return per gene

cell_type_filter

Optional vector of cell types to filter metacells

threshold

Minimum correlation threshold to include

Value

Data frame with correlation results