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Calculate correlations for genes as a module/anchor

Source: R/utils_gene_mc.R
calc_module_correlations.Rd

Calculate correlations for genes as a module/anchor

Usage

calc_module_correlations(
  dataset,
  genes,
  n_top = 30,
  cell_type_filter = NULL,
  threshold = 0,
  atlas = FALSE
)

Arguments

dataset

Dataset name

genes

Vector of gene names to treat as module

n_top

Number of top correlations to return

cell_type_filter

Optional vector of cell types to filter metacells

threshold

Minimum correlation threshold to include

Value

Data frame with correlation results