get_param()
Get params from saved var
get_param_list()
gtrack.create_redb_tracks()
Create a new redb for UMI-4C
init_params()
Read params from files
p4cBuildRequirements()
Build the required genomic datasets.
p4cCreate4CseqTrack()
Import fastq files to a genomic track.
p4cDumpConfFiles()
Dump config files templates.
p4cExportBedGraph()
Export bedGraph
p4cIntervalsMean()
Compare contacts intensities between two profiles
p4cLoadConfFiles()
Load all the config files required for the package.
p4cNewProfile()
Create a new p4cProfile object.
plot(<p4cProfile>) plotSingleProf() plotCompProf()
plot(<p4cProfile>)
plotSingleProf()
plotCompProf()
Plot 4C nearcis profile.