Build a cell graph using balanced knn after normalizing over a given metacell model

Build a cell graph using balanced knn after normalizing over a given metacell model

mcell_add_cgraph_bknn_norm_mc(graph_id, mat_id, gset_id, K, mc_to_norm)

Arguments

graph_id

new graph id to create

mat_id

matrix object id

gset_id

gset object id defining the gene features used for computing distances

K

the guideline Knn parameter. The balanced will be constructed aiming at K edges per cell