gnereate/filter gene features from coverage threshold in gstat table

mcell_gset_filter_cov(gstat_id, gset_id, T_tot, T_top3, force_new = F)

Arguments

gstat_id

the ID of the gstat object to use

gset_id

if this exists, filter_varmean will restrict hte current genes in the set with genes matching the var mean threshold, if not, it will generate a new gene sets object with one set including all high variance genes

T_tot

total down sampled coverage threhsold

T_top3

threshold value for the third highest umi count for the gene (only genes with top3>T_top3 are used)