15 Figures key

15.1 Figure 1

  • a: coverage-stats
  • b: coverage-stats
  • c: coverage-stats
  • d: coverage-stats
  • e: N/A
  • f: TME
  • g: TME
  • h: TME
  • i: Epigenomic scores / Loss-clock
  • j: Loss-clock
  • k: Loss-clock
  • l: Loss-clock
  • m: Loss-clock ## Figure 2
  • a: Epigenomic scores
  • b: Epigenomic scores
  • c: Epigenomic scores
  • d: epigenomic instability
  • e: epigenomic instability
  • f: epigenomic instability
  • g: epigenomic instability

15.2 Figure 3

  • a: Cis
  • b: Cis
  • c: Cis
  • d: Cis
  • e: Cis
  • f: Cis
  • g: Cis
  • h: Cis

15.3 Figure 4

  • a: Epigenomic scores
  • b: mutations
  • c: Epigenomic scores
  • d: Survival
  • e: TBA

15.4 Extended Data Figure 1

  • a: coverage-stats
  • b: coverage-stats
  • c: coverage-stats
  • d: coverage-stats

15.5 Extended Data Figure 2

  • a: TME
  • b: TME
  • c: TME
  • d: TBA
  • e: TBA
  • f: TBA
  • g: TBA

15.6 Extended Data Figure 3

  • a: TME
  • b: TME
  • c: TME
  • d: TME
  • e: TME

15.7 Extended Data Figure 4

  • a: Epigenomic scores
  • b: Epigenomic scores
  • c: Loss-clock
  • d: Loss-clock
  • e: Loss-clock
  • f: Loss-clock
  • g: Loss-clock
  • h: Loss-clock

15.8 Extended Data Figure 5

  • a: Loss-clock
  • b: Loss-clock
  • c: Loss-clock
  • d: Epigenomic scores
  • e: Epigenomic scores
  • f: Epigenomic scores
  • g: Epigenomic scores

15.9 Extended Data Figure 6

  • a: epigenomic instability
  • b: epigenomic instability
  • c: Epigenomic scores
  • d: epigenomic instability

15.10 Extended Data Figure 7

  • a: Epigenomic scores
  • b: Epignomic instability
  • c: Epignomic instability

15.11 Extended Data Figure 8

  • a: Cis
  • b: Cis
  • c: Cis
  • d: Cis
  • e: Cis

15.12 Extended Data Figure 9

  • a: dosage compensation
  • b: dosage compensation
  • c: dosage compensation
  • d: dosage compensation
  • e: dosage compensation
  • f: dosage compensation
  • g: dosage compensation
  • h: dosage compensation
  • i: dosage compensation

15.13 Extended Data Figure 10

  • a: Epigenomic scores
  • b: Epigenomic scores
  • c: CNA
  • d: Survival
  • e: TBA